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Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
chromatin state
1
eQTL
1
gene expression
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
36
heart
33
muscle of arm
30
lung
29
brain
29
stomach
28
muscle of back
27
large intestine
27
muscle of leg
26
left lung
26
placenta
25
kidney
25
small intestine
22
right lung
20
renal cortex interstitium
20
right kidney
20
thymus
18
left kidney
16
adrenal gland
14
spinal cord
8
muscle of trunk
6
heart left ventricle
6
left renal cortex interstitium
6
retina
5
right renal cortex interstitium
4
eye
4
heart right ventricle
4
liver
4
spleen
4
tongue
3
chorion membrane
3
limb
3
testis
2
amnion
2
chorion
2
femur
2
germinal matrix
2
left cardiac atrium
2
ovary
2
placental basal plate
2
psoas muscle
2
sigmoid colon
2
skeletal muscle tissue
2
umbilical cord
1
arm bone
1
endocrine pancreas
1
forelimb muscle
1
germinal center
1
hindlimb muscle
1
left leg bone
1
leg bone
1
right arm bone
1
skin of body
1
urinary bladder
Organ
2
musculature of body
Life stage
adult
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
embryo
ureter
relevant_life_stage!
adult
Showing 2 of 2 results
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Download
FileSet
DSR284HQL
released
Annotation file set
: Candidate regulatory elements for BSS01577 skeletal muscle tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR938WUX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP