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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
23
candidate regulatory elements
16
target gene predictions
13
gene expression
eQTL
3
accessible chromatin
3
variant allelic effects
2
binding sites
2
chromatin state
2
differential activity
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed3+
1
bigBed bed9
File set status
2
released
Genome assembly (visualization)
13
hg19
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
7
connective tissue
6
brain
4
intestine
4
pancreas
3
epithelium
3
large intestine
3
liver
3
musculature of body
2
adipose tissue
2
blood
2
bodily fluid
1
blood vessel
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
vasculature
1
vein
0
skeleton
Date released
2
August, 2017
Software used
2
chromhmm
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
annotation_type!
eQTL
assembly!
GRCh38
Showing 2 of 2 results
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Download
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR033945
released
Annotation file set
: ChromHMM 18-state model for Adipose Nuclei
Lab:
AMP-T2D consortium
Project:
AMP