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Schema
Citing CMDGA
Clear Filters
Annotation type
253
gene expression
207
accessible chromatin
92
differential activity
73
target gene predictions
62
candidate regulatory elements
43
binding sites
41
variant allelic effects
27
histone modifications
5
chromatin state
3
eQTL
2
caQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
3
bed bed3+
2
bed bed9
2
bigBed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
3
endothelial cell of umbilical vein
1
keratinocyte
1
mammary epithelial cell
Organ
15
heart
12
brain
9
blood vessel
9
vasculature
8
connective tissue
6
musculature of body
5
epithelium
4
intestine
4
limb
4
pancreas
3
large intestine
3
liver
3
vein
2
adipose tissue
2
artery
2
blood
2
bodily fluid
2
kidney
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
nerve
1
skin of body
1
small intestine
1
stomach
Date released
September, 2022
3
August, 2017
2
January, 2020
Software used
5
chromhmm
Lab
3
Stephen Parker, UMich
2
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
sQTL
biosample_term_name!
trophoblast
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR926942
released
Annotation file set
: ChromHMM 13-state model for NHEK
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR538274
released
Annotation file set
: ChromHMM 13-state model for HMEC
Lab:
Stephen Parker, UMich
Project:
AMP