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Citing CMDGA
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Annotation type
6
candidate regulatory elements
5
chromatin state
target gene predictions
1
caQTL
1
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed9
2
bigBed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
primary cell
Biosample term
5
endothelial cell of umbilical vein
4
aorta
3
ascending aorta
3
coronary artery
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
Organ
5
blood vessel
5
vasculature
1
connective tissue
Life stage
4
adult
1
unknown
Date released
3
September, 2022
2
January, 2020
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
target gene predictions
organ_slims!
breast
Showing 5 of 5 results
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Download
FileSet
DSR159VQB
released
Annotation file set
: Chromatin states for BSS00347 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR322ZFG
released
Annotation file set
: Chromatin states for BSS00080 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR374NZY
released
Annotation file set
: Chromatin states for BSS00079 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR371GSC
released
Annotation file set
: ChromHMM 18-state model for heart aorta from ENCODE ChIP-seq data. ROADMAP aorta Annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR429DXE
released
Annotation file set
: ChromHMM 15-state model for heart aorta from ENCODE ChIP-seq data. ROADMAP aorta Annotation
Lab:
AMP-T2D consortium
Project:
AMP