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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
1
colon carcinoma
Disease term
18
lung epithelial-myoepithelial carcinoma
8
Philadelphia-positive myelogenous leukemia
6
large-cell immunoblastic lymphoma
5
breast cancer
5
colorectal adenocarcinoma
5
neuroblastoma
4
prostate adenocarcinoma
3
acute lymphoblastic leukemia
cervical adenocarcinoma
3
endometrium adenocarcinoma
3
glioblastoma
3
hepatocellular carcinoma
3
parathyroid gland clear cell adenoma
2
Burkitt lymphoma
2
acute promyelocytic leukemia
2
breast ductal adenocarcinoma
2
melanoma
2
osteosarcoma
2
plasma cell myeloma
2
renal cell adenocarcinoma
1
Ewing sarcoma
1
adenoid cystic carcinoma
1
clear cell renal carcinoma
1
colon carcinoma
1
fibrosarcoma
1
glioma
1
lung adenocarcinoma
1
lung large cell carcinoma
1
metastatic melanoma
1
pancreatic adenocarcinoma
1
pancreatic ductal adenocarcinoma
1
prostate cancer
1
prostate carcinoma
1
retinoblastoma
1
squamous cell carcinoma
1
testicular embryonal carcinoma
Life stage
1
unknown
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
variant to gene
disease_term_name!
cervical adenocarcinoma
month_released!
October, 2022
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Download
FileSet
DSR302JLL
released
Annotation file set
: Chromatin states for BSS01535 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP