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Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
4
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
2
eQTL
1
gene expression
1
histone modifications
0
differential activity
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
cell line
Biosample term
3
testis
1
NT2-D1 cell
Disease term
1
testicular embryonal carcinoma
Organ
145
epithelium
117
kidney
75
musculature of body
72
brain
71
lung
62
connective tissue
59
intestine
51
heart
51
vasculature
50
limb
50
pancreas
40
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
21
liver
20
small intestine
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
12
adipose tissue
11
thymus
10
artery
10
penis
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
lymphatic vessel
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
2
adult
1
embryonic
1
unknown
Date released
4
September, 2022
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
kidney
Showing 4 of 4 results
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FileSet
DSR549AED
released
Annotation file set
: Chromatin states for BSS01386 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR845ZVQ
released
Annotation file set
: Chromatin states for BSS01719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR211VUO
released
Annotation file set
: Chromatin states for BSS01718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666MOR
released
Annotation file set
: Chromatin states for BSS01715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP