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Schema
Citing CMDGA
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Annotation type
28
candidate regulatory elements
16
target gene predictions
12
binding sites
5
histone modifications
4
accessible chromatin
1
chromatin state
1
variant allelic effects
0
gene expression
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
15
hg19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
mammary epithelial cell
Organ
247
epithelium
202
kidney
56
connective tissue
52
pancreas
33
vasculature
25
brain
22
blood vessel
21
heart
18
liver
15
adipose tissue
14
musculature of body
11
embryo
8
artery
7
intestine
5
bone element
5
large intestine
5
limb
3
blood
3
bodily fluid
3
lymphatic vessel
3
skin of body
stomach
2
esophagus
2
gonad
2
lung
2
nerve
2
uterus
2
vein
1
adrenal gland
1
bone marrow
1
breast
1
eye
1
lymphoid tissue
1
mammary gland
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
prostate gland
1
small intestine
1
spinal cord
1
spleen
1
testis
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
assembly!
GRCh38
organ_slims!
stomach
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Download
FileSet
TSTSR538274
released
Annotation file set
: ChromHMM 13-state model for HMEC
Lab:
Stephen Parker, UMich
Project:
AMP