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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
1
histone modifications
1
variant allelic effects
0
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
4
bed bed9
2
bigBed bed9
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
tissue
Biosample term
5
endothelial cell of umbilical vein
Organ
300
epithelium
208
kidney
71
connective tissue
48
vasculature
38
pancreas
32
blood vessel
32
skin of body
31
embryo
29
liver
28
lung
27
bodily fluid
25
blood
16
brain
15
mammary gland
12
bone element
12
musculature of body
11
prostate gland
10
extraembryonic component
10
penis
9
heart
8
artery
8
lymph node
5
lymphatic vessel
5
vein
4
eye
4
intestine
4
large intestine
3
uterus
2
bone marrow
2
bronchus
2
mouth
2
placenta
1
adipose tissue
1
esophagus
1
gonad
1
limb
1
lymphoid tissue
1
nose
1
pericardium
1
spinal cord
1
testis
Life stage
2
newborn
Date released
2
January, 2020
2
September, 2022
1
August, 2017
Software used
5
chromhmm
Lab
4
AMP-T2D consortium
1
Stephen Parker, UMich
Project
5
AMP
RFA
5
AMP
biosample_term_name!
breast epithelium
biosample_type!
tissue
Showing 5 of 5 results
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Download
FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP