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Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
4
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
2
eQTL
1
gene expression
1
histone modifications
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
1
RNA-seq
Available data
4
bed bed9
1
tsv
File set status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Biosample term
4
testis
1
NT2-D1 cell
Disease term
1
testicular embryonal carcinoma
Organ
304
epithelium
279
kidney
97
connective tissue
91
brain
85
musculature of body
72
heart
72
lung
69
vasculature
65
pancreas
62
intestine
55
limb
53
blood vessel
41
liver
38
embryo
38
large intestine
37
skin of body
33
extraembryonic component
28
bodily fluid
26
blood
26
stomach
23
adipose tissue
20
small intestine
19
bone element
16
artery
16
placenta
15
adrenal gland
15
mammary gland
14
prostate gland
13
ureter
11
thymus
10
eye
10
gonad
10
penis
9
esophagus
9
spinal cord
8
lymph node
7
spleen
6
lymphoid tissue
6
nerve
6
uterus
6
vein
5
lymphatic vessel
5
mouth
5
ovary
5
testis
5
thyroid gland
3
skeleton
3
tongue
3
urinary bladder
3
vagina
2
bone marrow
2
bronchus
1
breast
nose
1
pericardium
1
pituitary gland
Life stage
3
adult
1
embryonic
1
unknown
Date released
4
September, 2022
1
March, 2024
Software used
4
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
breast epithelium
organ_slims!
nose
Showing 5 of 5 results
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Download
FileSet
DSR562FVN
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Testis.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549AED
released
Annotation file set
: Chromatin states for BSS01386 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR845ZVQ
released
Annotation file set
: Chromatin states for BSS01719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR211VUO
released
Annotation file set
: Chromatin states for BSS01718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666MOR
released
Annotation file set
: Chromatin states for BSS01715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP