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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
5
target gene predictions
4
binding sites
4
chromatin state
3
gene expression
2
differential activity
2
histone modifications
Annotation Category
4
cis-regulatory elements
3
Gene expression levels
Annotation type Category
4
ChIP-seq
3
single cell RNA-seq
Available data
4
bed bed9
3
tsv
File set status
7
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
primary cell
Biosample term
23
heart
23
kidney
20
stomach
19
brain
18
A549
17
lung
16
epithelial cell of proximal tubule
16
muscle of arm
15
adrenal gland
15
hepatocyte
15
monocyte
15
muscle of leg
15
small intestine
14
glomerular endothelial cell
14
islet of Langerhans
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right lung
11
thymus
10
B cell
10
T-helper 1 cell
10
liver
10
regulatory T cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
T-helper 17 cell
9
adipose tissue
9
extended pluripotent stem (EPS) cells
9
heart left ventricle
9
induced pluripotent stem cell
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
EndoC_BH1
8
adipocyte
7
CD8-positive, alpha-beta memory T cell
7
K562
7
endothelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
spinal cord
7
spleen
6
T-helper 2 cell
6
body of pancreas
6
embryonic stem cell
6
glomerular visceral epithelial cell
6
kidney interstitial cell
6
left cardiac atrium
6
mononuclear cell
6
pancreatic ductal cell
6
subcutaneous adipose tissue
6
temporal lobe
6
tibial nerve
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
caudate nucleus
5
endothelial cell of umbilical vein
5
heart right ventricle
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
ovary
5
sigmoid colon
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
ascending aorta
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
endothelial cell of hepatic sinusoid
4
fibroblast of lung
4
foreskin keratinocyte
4
frontal cortex
4
gamma-delta T cell
4
gastrocnemius medialis
4
layer of hippocampus
4
mesenchymal stem cell
4
muscle of trunk
4
natural killer cell
4
nephron progenitor
4
neural progenitor cell
4
omental fat pad
4
psoas muscle
4
retina
4
right atrium auricular region
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skeletal muscle tissue
4
substantia nigra
4
testis
4
thyroid gland
4
tibial artery
4
transverse colon
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
HeLa-S3
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Peyer's patch
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
mammary gland epithelial cell
3
memory B cell
3
mucosa of rectum
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
osteoblast
3
pancreas
Disease term
1
acute kidney failure
1
chronic kidney disease
Organ
3
epithelium
3
kidney
Life stage
4
embryonic
3
adult
Date released
August, 2021
4
September, 2022
3
September, 2023
Software used
4
chromhmm
3
r
Lab
4
AMP-T2D consortium
3
KPMP
Project
4
AMP
3
KPMP
RFA
4
AMP
3
KPMP
biosample_term_name!
endothelial cell of hepatic sinusoid
month_released!
August, 2021
Showing 7 of 7 results
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Download
FileSet
DSR313KTO
released
Annotation file set
: Gene expression annotation of Parietal Epithelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR826JEV
released
Annotation file set
: Gene expression annotation of Parietal Epithelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR516MLG
released
Annotation file set
: Gene expression annotation of Parietal Epithelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR048DMI
released
Annotation file set
: Chromatin states for BSS01372 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR866LQQ
released
Annotation file set
: Chromatin states for BSS01371 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR285WEC
released
Annotation file set
: Chromatin states for BSS01370 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR377DHA
released
Annotation file set
: Chromatin states for BSS00272 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP