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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
3
eQTL
2
target gene predictions
1
gene expression
1
histone modifications
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
1
RNA-seq
Available data
2
bed bed9
1
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
18
brain
6
temporal lobe
5
caudate nucleus
4
angular gyrus
4
cerebellum
4
frontal cortex
4
layer of hippocampus
4
substantia nigra
3
cingulate gyrus
2
Ammon's horn
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
putamen
1
A172
1
BE(2)-C
1
Daoy
1
H54
1
M059J
1
SK-N-MC
1
amygdala
1
anterior cingulate cortex
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
globus pallidus
1
hippocampal neuron
1
hypothalamus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
nucleus accumbens
1
pituitary
1
pons
Organ
4
brain
Life stage
3
adult
Date released
2
September, 2022
1
August, 2017
1
January, 2020
Software used
3
chromhmm
1
r
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
month_released!
November, 2019
Showing 4 of 4 results
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Download
FileSet
DSR065QGY
released
Annotation file set
: Chromatin states for BSS01676 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR373BCA
released
Annotation file set
: Chromatin states for BSS01675 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR207SBP
released
Annotation file set
: Gene expression summary of TPM of brain substantia nigra from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR828132
released
Annotation file set
: ChromHMM 13-state model for substantia nigra
Lab:
Stephen Parker, UMich
Project:
AMP