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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
39
candidate regulatory elements
26
accessible chromatin
25
gene expression
25
target gene predictions
16
binding sites
12
differential activity
9
Fine-mapped variants
9
variant allelic effects
6
eQTL
6
histone modifications
3
caQTL
1
chromatin state
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
bed bed9
8
bigBed bed9
7
bed bed3+
1
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
4
primary cell
2
cell line
1
tissue
Biosample term
1
aortic endothelial cell
1
circle of Willis
1
endothelial cell of umbilical vein
1
fibroblast of pulmonary artery
1
pulmonary artery endothelial cell
1
smooth muscle cell of the coronary artery
1
vein endothelial cell
Organ
54
brain
32
connective tissue
31
epithelium
27
bodily fluid
26
blood
17
liver
14
skin of body
12
embryo
12
intestine
11
heart
10
musculature of body
10
pancreas
9
vasculature
8
large intestine
7
blood vessel
7
bone element
7
prostate gland
6
kidney
6
mammary gland
5
artery
5
extraembryonic component
5
lung
5
penis
4
eye
4
lymph node
3
adipose tissue
3
bone marrow
3
placenta
2
limb
2
stomach
2
trachea
2
uterus
2
vein
1
bronchus
1
gonad
1
lymphatic vessel
1
lymphoid tissue
1
pituitary gland
1
small intestine
1
testis
1
thymus
Life stage
1
unknown
Date released
5
February, 2021
1
August, 2017
1
September, 2022
Software used
6
macs
1
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
biosample_term_name!
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files.file_type!
bed bed9
Showing 7 of 7 results
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Download
FileSet
DSR002ARU
released
Annotation file set
: Histone modifications of human aortic endothelial cells (HAEC) in response to shear stress forces unidirectional flow(UF) using ChIP-Seq of H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR118QJN
released
Annotation file set
: Histone modifications annotation for Uterus TIVE-LTC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR220BBP
released
Annotation file set
: Histone modifications annotation for Cardiovascular Large_pulmonary_artery_endothelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR101YYN
released
Annotation file set
: Histone modifications annotation for Cardiovascular HPAF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR951OND
released
Annotation file set
: Histone modifications annotation for Cardiovascular HCASMC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR338ZRB
released
Annotation file set
: Histone modifications annotation for Cardiovascular Circle_of_Willis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP