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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
0
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
86
monocyte
31
CD8-positive, alpha-beta T cell
20
heart
20
neural progenitor cell
20
stomach
19
A549
19
brain
16
kidney
16
lung
16
muscle of arm
16
placenta
15
small intestine
14
adrenal gland
14
large intestine
13
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
13
muscle of leg
12
thymus
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
11
right lung
10
B cell
10
liver
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
gastric cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
K562
8
Rhabdomyosarcoma
8
mature neutrophil
8
neuroblastoma cell
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
HepG2
7
MCF-7
7
adipocyte
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
adipose tissue
6
hESC cell
6
heart left ventricle
6
hepatocyte
6
keratinocyte
6
left cardiac atrium
6
liposarcoma
6
mononuclear cell
6
neuroblastoma cell line
6
spleen
6
squamous cell lung carcinoma
6
trophoblast cell
5
CD14-positive, CD16-negative classical monocyte
5
T cell
5
T-cell acute lymphoblastic leukemia
5
caudate nucleus
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
layer of hippocampus
5
melanoma cell
5
natural killer cell
5
osteosarcoma
5
sigmoid colon
4
CD14-positive monocyte
4
alternatively activated macrophage
4
body of pancreas
4
bronchial epithelial cell
4
chorionic villus
4
colonic mucosa
4
endocrine pancreas
4
fibroblast of lung
4
foreskin fibroblast
4
gastrocnemius medialis
4
mammary epithelial cell
4
mammary gland epithelial cell
4
muscle of trunk
4
ovary
4
prostate gland
4
psoas muscle
4
regulatory T cell
4
retina
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
skeletal muscle tissue
4
substantia nigra
4
temporal lobe
4
testis
4
thyroid gland
4
transverse colon
4
upper lobe of left lung
3
22Rv1
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
GM12878
3
H1-hESC
3
HeLa-S3
3
KARPAS-422 cell
3
NAMALWA cell
3
Peyer's patch
3
SK-N-DZ
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
acute myeloid leukemia
3
cardiac muscle cell
3
cerebellum
3
chorion membrane
3
cingulate gyrus
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
duodenal mucosa
3
endodermal cell
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
epithelial cell of prostate
3
esophageal squamous cell carcinoma
3
fibroblast of dermis
3
glioblastoma cell
3
glioma cell
3
heart right ventricle
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
islet of Langerhans
3
lymphoblast
3
lymphoblastoid cell line
3
mesenchymal stem cell
3
mucosa of rectum
3
naive T cell
3
neuronal stem cell
3
neurosphere
3
osteoblast
3
pancreas
3
pancreatic ductal adenocarcinoma
3
skin fibroblast
3
stomach smooth muscle
3
tibial nerve
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO205
2
Caco-2 cell
2
ESC derived cell line
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
H7-hESC
2
HAP-1
2
HEK293
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HuH-7
2
IMR-90
2
JVM-2 cell
2
Jurkat
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY7
2
PC-3
2
PC-9
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SK-MEL-5
2
SK-N-MC
2
SK-N-SH
2
SW480
2
T47D
2
Th1 cell
2
U-266 cell
2
VCaP cell
2
WERI-Rb-1
Disease term
3
endometrium adenocarcinoma
Life stage
3
adult
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
G401
files.file_type!
bigBed bed9
Showing 3 of 3 results
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Download
FileSet
DSR560PMK
released
Annotation file set
: Chromatin states for BSS00756 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR018SNQ
released
Annotation file set
: Chromatin states for BSS00748 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR199OVE
released
Annotation file set
: Chromatin states for BSS00745 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP