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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
3
histone modifications
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
86
monocyte
31
CD8-positive, alpha-beta T cell
13
common myeloid progenitor, CD34-positive
9
CD4-positive, alpha-beta memory T cell
8
B cell
8
mature neutrophil
7
CD8-positive, alpha-beta memory T cell
6
mononuclear cell
5
CD14-positive, CD16-negative classical monocyte
5
endothelial cell of umbilical vein
5
hepatocyte
5
keratinocyte
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
fibroblast of lung
4
foreskin keratinocyte
4
mammary epithelial cell
4
natural killer cell
4
regulatory T cell
4
skeletal muscle myoblast
3
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
bronchial epithelial cell
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
foreskin fibroblast
3
inflammatory macrophage
3
mammary gland epithelial cell
3
naive T cell
3
neurosphere
3
osteoblast
2
CD1c-positive myeloid dendritic cell
2
acute myeloid leukemia cell
2
astrocyte
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of prostate
2
erythroblast
2
fibroblast of breast
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
hepatic stellate cell
2
kidney tubule cell
2
mantle cell lymphoma cell
2
myoepithelial cell of mammary gland
2
neutrophil
2
pancreatic ductal cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
pulmonary artery endothelial cell
2
retinal pigment epithelial cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
tracheal epithelial cell
1
Adipose stromal cell
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th1 cell
1
Th17 cell
1
acute myeloid leukemia
1
alveolar cell type II
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
aortic endothelial cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bone cell
1
bone marrow cell
1
brain microvascular endothelial cell
1
cardiac muscle myoblast
1
choroid plexus epithelial cell
1
chronic lymphocytic leukemia cell
1
columnar chondrocyte
1
endothelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythroid cell
1
erythroid progenitor cell
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
foreskin melanocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulocyte
1
head and neck neoplasia
1
head and neck squamous cell carcinoma
1
intestinal epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
leukemic stem cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary stem cell
1
mast cell
1
mature eosinophil
1
meningioma cell
1
mesenchymal stem cell
1
meso-epithelial cell
1
mononuclear cell of bone marrow
1
mycosis fungoides
1
myeloid leukocyte
1
myotube
1
neoplastic cell
1
neural progenitor cell
1
neuronal stem cell
1
neutrophil progenitor cell
1
non-pigmented ciliary epithelial cell
1
pancreatic endocrine cell
1
pericyte cell
1
peripheral blood
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
plasma cell
1
prostate gland cancer cell
1
pulmonary interstitial fibroblast
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
renal epithelial cell
1
renal proximal tubule cell
1
seminoma cell
1
skeletal muscle cell
1
small cell ovarian carcinoma cell
1
smooth muscle cell of the brain vasculature
1
somatic muscle myotube
1
sperm
1
stromal cell of bone marrow
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
urinary bladder cancer cell
Organ
2
epithelium
2
eye
Life stage
1
unknown
Date released
3
February, 2021
1
September, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
leukemic stem cell
Showing 4 of 4 results
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Download
FileSet
DSR856FNO
released
Annotation file set
: Chromatin states for BSS01505 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR474DDE
released
Annotation file set
: Histone modifications annotation for Neural HRPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229QNR
released
Annotation file set
: Histone modifications annotation for Blood SP-49 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267JTF
released
Annotation file set
: Histone modifications annotation for Blood Lymphoma,_Mantle-Cell from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP