Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
3
Fine-mapped variants
3
accessible chromatin
3
target gene predictions
2
eQTL
2
gene expression
2
variant allelic effects
0
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
tibial nerve
Organ
120
brain
83
kidney
81
epithelium
81
musculature of body
75
lung
73
connective tissue
67
intestine
57
heart
52
bodily fluid
52
limb
49
blood
48
skin of body
41
large intestine
41
vasculature
39
embryo
38
extraembryonic component
34
blood vessel
31
liver
25
stomach
23
pancreas
21
bone element
20
mammary gland
20
prostate gland
20
small intestine
19
placenta
15
penis
14
adrenal gland
13
artery
13
eye
13
ureter
12
lymph node
12
thymus
11
adipose tissue
9
gonad
8
spinal cord
7
esophagus
lymphoid tissue
6
spleen
6
uterus
6
vein
5
testis
4
bone marrow
4
mouth
4
nerve
4
ovary
4
thyroid gland
3
bronchus
3
lymphatic vessel
skeleton
2
breast
2
tongue
2
trachea
2
urinary bladder
2
vagina
1
nose
1
pituitary gland
Life stage
4
adult
Date released
3
September, 2022
1
May, 2020
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
lymphoid tissue
skeleton
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR677PFH
released
Annotation file set
: Chromatin states for BSS01842 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR344NSW
released
Annotation file set
: Chromatin states for BSS01841 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR764TDU
released
Annotation file set
: Chromatin states for BSS01840 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR205IDN
released
Annotation file set
: ChromHMM 18-state model for nerve tibial from 28 ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP