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Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
7
candidate regulatory elements
5
chromatin state
4
binding sites
4
gene expression
4
histone modifications
4
target gene predictions
3
Fine-mapped variants
3
eQTL
2
differential activity
2
variant allelic effects
0
pQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed9
1
bigBed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
3
tibial artery
1
fibroblast of pulmonary artery
1
pulmonary artery endothelial cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
intestine
53
epithelium
heart
50
connective tissue
50
limb
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
bodily fluid
28
embryo
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
3
adult
2
unknown
Date released
4
September, 2022
1
May, 2020
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
heart
intestine
Showing 5 of 5 results
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Download
FileSet
DSR520FED
released
Annotation file set
: Chromatin states for BSS01838 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ACD
released
Annotation file set
: Chromatin states for BSS01837 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860ZEJ
released
Annotation file set
: Chromatin states for BSS00345 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR288KBX
released
Annotation file set
: Chromatin states for BSS01465 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157HZX
released
Annotation file set
: ChromHMM 18-state model for tibial artery from 26 ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP