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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
5
chromatin state
1
gene expression
1
target gene predictions
Annotation Category
5
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed9
5
bigBed bed9
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
cell line
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
6
dendritic cell
5
embryonic stem cell
4
adipocyte
2
BJAB cell
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
Jurkat
2
MCF 10A cell
2
T-cell
2
THP-1
2
U937
2
adrenal gland
2
stomach
2
trophoblast cell
1
A549
1
A673
1
B cell
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
adipose tissue
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
cardiac muscle cell
1
cardiac ventricle
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
erythroblast
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastrocnemius medialis
1
hepatocyte
1
iPS DF 19.11
1
induced pluripotent stem cell
1
keratinocyte
1
large intestine
1
liver
1
macrophage
1
mammary epithelial cell
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal stem cell
1
mesendoderm
1
monocyte
1
muscle of leg
1
muscle of trunk
1
myotube
1
natural killer cell
1
neuronal stem cell
1
osteoblast
1
ovary
1
pancreas
1
pancreatic A cell
1
pancreatic acinar cell
1
pancreatic ductal cell
1
placenta
1
psoas muscle
1
sigmoid colon
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
thymus
1
thyroid gland
1
transverse colon
1
type B pancreatic cell
1
uterus
1
white adipose tissue
Organ
1
musculature of body
Date released
6
May, 2021
2
September, 2022
1
March, 2020
Software used
5
chromhmm
1
abc
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR103NWH
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Late pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR146BON
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Early pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR622ZAP
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Gut tube cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR148OGH
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Embyonic stem cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044ECG
released
Annotation file set
: Chromatin state of differentiated hESCs from GSE149148 at developmental stage Definitive endoderm cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP