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Schema
Citing CMDGA
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Annotation type
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
29
placenta
12
trophoblast cell
11
MCF-7
8
chorionic villus
7
mammary gland epithelial cell
6
chorion membrane
4
T47D
4
luminal epithelial cell of mammary gland
4
myoepithelial cell of mammary gland
2
HTR-8/Svneo
2
amnion
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
epithelial cell of amnion
2
fibroblast of mammary gland
2
fibroblast of villous mesenchyme
2
mammary epithelial cell
2
umbilical cord
Organ
2
connective tissue
2
mammary gland
0
extraembryonic component
Life stage
2
unknown
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
large intestine
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Download
FileSet
DSR802BSP
released
Annotation file set
: Target gene predictions for BSS00343 fibroblast of mammary gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR848OMG
released
Annotation file set
: Chromatin states for BSS00343 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP