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Citing CMDGA
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Annotation type
7
candidate regulatory elements
4
binding sites
3
target gene predictions
2
chromatin state
2
histone modifications
1
accessible chromatin
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
cell line
Biosample term
8
foreskin keratinocyte
5
foreskin fibroblast
2
EH
2
EL
2
ELR
2
foreskin melanocyte
Organ
5
connective tissue
5
penis
5
skin of body
Life stage
4
newborn
Date released
4
September, 2022
1
May, 2021
Software used
2
chromhmm
2
r
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
month_released!
January, 2018
organ_slims!
thyroid gland
Showing 5 of 5 results
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FileSet
DSR923ELC
released
Annotation file set
: Target gene predictions for BSS00697 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR058XGD
released
Annotation file set
: Target gene predictions for BSS00353 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR652XRA
released
Annotation file set
: Chromatin states for BSS00353 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR126PKD
released
Annotation file set
: Chromatin states for BSS00697 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR506HNX
released
Annotation file set
: enhancer-gene predicton of foreskin_fibroblast-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP