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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
0
stem cell
Biosample term
27
common myeloid progenitor, CD34-positive
23
CD14-positive monocyte
18
B cell
18
CD4-positive, alpha-beta memory T cell
14
CD8-positive, alpha-beta memory T cell
12
mononuclear cell
11
pericyte cell
9
endothelial cell of umbilical vein
9
trophoblast cell
8
T cell
8
fibroblast of lung
8
foreskin keratinocyte
8
keratinocyte
8
natural killer cell
7
endothelial cell
7
fibroblast of cardiac tissue
7
fibroblast of dermis
7
mammary gland epithelial cell
7
mature neutrophil
7
regulatory T cell
6
CD4-positive, alpha-beta T cell
6
CD8-positive, alpha-beta T cell
6
T-helper 1 cell
6
T-helper 17 cell
6
T-helper 2 cell
6
naive T cell
6
neurosphere
6
olfactory receptor cell
6
smooth muscle cell
5
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
5
astrocyte
5
epithelial cell of prostate
5
neutrophil
5
skeletal muscle myoblast
5
skin fibroblast
4
bronchial epithelial cell
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
erythroblast
4
fibroblast
4
fibroblast of breast
4
hepatocyte
4
inflammatory macrophage
4
kidney tubule cell
4
luminal epithelial cell of mammary gland
4
myoepithelial cell of mammary gland
4
pancreatic delta cell
4
skeletal muscle satellite cell
3
colon epithelial cell
3
foreskin fibroblast
3
macrophage
3
osteoblast
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
blood vessel smooth muscle cell
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
cortical cell of adrenal gland
2
enteric smooth muscle cell
2
epidermal melanocyte
2
epithelial cell of amnion
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
foreskin melanocyte
2
gabaergic neuron
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
glutamatergic neuron
2
hepatic stellate cell
2
iris pigment epithelial cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
lung microvascular endothelial cell
2
mammary epithelial cell
2
mammary stem cell
2
megakaryocyte
2
memory B cell
2
mesenchymal stem cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
regular cardiac myocyte
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
smooth muscle cell of the brain vasculature
2
smooth muscle cell of the esophagus
2
stromal cell of bone marrow
2
type II pneumocyte
1
B cell, CD19-positive
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD56-positive, CD161-positive immature natural killer cell
1
H1-hESC
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
cardiac endothelial cell
1
cardiac muscle cell
1
cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
fat cell
1
fibroblast of arm
1
foveolar cell of stomach
1
granular cell of epidermis
1
intestinal tuft cell
1
luteal cell
1
mast cell
1
mature NK T cell
1
mature eosinophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesendoderm
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
schwann cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
undifferentiated ESC (H9 cell line)
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Life stage
2
adult
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
renal cortical epithelial cell
Showing 2 of 2 results
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Download
FileSet
DSR139AGU
released
Annotation file set
: Target gene predictions for BSS01216 mammary stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR506MWQ
released
Annotation file set
: Chromatin states for BSS01216 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP