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Schema
Citing CMDGA
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Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
2
eQTL
2
target gene predictions
2
variant allelic effects
1
gene expression
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
3
bed bed9
2
bed bed3+
1
bigBed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
8
aorta
6
coronary artery
5
ascending aorta
5
thoracic aorta
5
tibial artery
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
Organ
5
artery
5
blood vessel
5
limb
5
vasculature
Life stage
5
adult
Date released
4
September, 2022
1
May, 2020
Software used
3
chromhmm
2
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
epithelium
Showing 5 of 5 results
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Download
FileSet
DSR780QVZ
released
Annotation file set
: Target gene predictions for BSS01838 tibial artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR685TUQ
released
Annotation file set
: Target gene predictions for BSS01837 tibial artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR520FED
released
Annotation file set
: Chromatin states for BSS01838 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ACD
released
Annotation file set
: Chromatin states for BSS01837 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157HZX
released
Annotation file set
: ChromHMM 18-state model for tibial artery from 26 ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP