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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
accessible chromatin
4
chromatin state
2
variant allelic effects
1
gene expression
Annotation Category
4
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
4
ChIP-seq
2
snATAC-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
primary cell
Biosample term
6
fibroblast
5
adipocyte
5
left cardiac atrium
3
enterocyte
3
macrophage
3
myofibroblast cell
2
ESC derived cell line
2
Schwann cell
2
T cell
2
basal cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
islet of Langerhans
2
keratinocyte
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
Satellite Cells, Skeletal Muscle
1
bronchial goblet cell
1
cardiac muscle cell
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
cortical cell of adrenal gland
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
granulosa cell
1
hepatocyte
1
layer of hippocampus
1
liver
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
mid-frontal lobe
1
mucosa of rectum
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
purified protein and synthetic DNA oligo binding assay
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
1
thyroid follicular cell
1
type II pneumocyte
Organ
5
connective tissue
1
epithelium
Date released
4
August, 2017
2
February, 2024
Software used
4
chromhmm
2
deltasvm
Lab
4
Stephen Parker, UMich
AMP-T2D consortium
2
Bing Ren, UCSD
Project
6
AMP
RFA
6
AMP
biosample_term_name!
body of pancreas
lab.title!
AMP-T2D consortium
Showing 6 of 6 results
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Download
FileSet
DSR198EFG
released
Annotation file set
: Variant allelic effects annotation of Mesothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR476AJZ
released
Annotation file set
: Variant allelic effects annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP