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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
chromatin state
2
target gene predictions
1
accessible chromatin
0
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
23
heart
19
brain
19
stomach
18
A549
17
kidney
17
muscle of arm
16
lung
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right kidney
11
right lung
11
thymus
10
heart left ventricle
10
renal cortex interstitium
10
renal pelvis
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
8
B cell
7
CD8-positive, alpha-beta memory T cell
7
K562
7
adipose tissue
7
left cardiac atrium
7
mature neutrophil
7
spinal cord
6
T cell
6
endothelial cell of umbilical vein
6
fibroblast
6
heart right ventricle
6
mononuclear cell
6
spleen
6
tibial nerve
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
body of pancreas
5
caudate nucleus
5
coronary artery
5
sigmoid colon
5
temporal lobe
5
tibial artery
4
CD14-positive monocyte
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
ascending aorta
4
chorionic villus
4
endocrine pancreas
4
fibroblast of lung
4
foreskin keratinocyte
4
gastrocnemius medialis
4
islet of Langerhans
4
keratinocyte
4
layer of hippocampus
4
mammary gland epithelial cell
4
muscle of trunk
4
ovary
4
pancreas
4
psoas muscle
4
retina
4
right atrium auricular region
4
skeletal muscle myoblast
4
thoracic aorta
4
thyroid gland
4
transverse colon
4
trophoblast cell
3
CD4-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
endometrium adenocarcinoma
3
enterocyte
3
epithelial cell of esophagus
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
frontal cortex
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
left renal cortex interstitium
3
left renal pelvis
3
macrophage
3
mucosa of rectum
3
myofibroblast cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
stomach smooth muscle
3
substantia nigra
3
testis
3
upper lobe of left lung
2
cardiac fibroblast
2
muscle of leg
2
22Rv1
2
Brodmann (1909) area 46
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
KARPAS-422 cell
2
LNCaP clone FGC
2
MIN6
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
Schwann cell
2
T47D
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
breast epithelium
2
bronchial epithelial cell
2
cardiac muscle cell
2
cerebellum
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endothelial cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
germinal matrix
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
goblet cell
2
hepatic stellate cell
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
limb
2
lower leg skin
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
occipital lobe
2
omental fat pad
2
parathyroid adenoma
2
pons
2
prostate gland
2
putamen
2
rectum smooth muscle tissue
2
renal cortical epithelial cell
2
skeletal muscle cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell
2
smooth muscle cell of the brain vasculature
2
subcutaneous adipose tissue
2
superior temporal gyrus
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
Organ
2
eye
Life stage
2
embryonic
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
kidney capillary endothelial cell
biosample_type!
in vitro differentiated cells
Showing 2 of 2 results
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Download
FileSet
DSR039FYT
released
Annotation file set
: Chromatin states for BSS00329 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608IBO
released
Annotation file set
: Chromatin states for BSS00328 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP