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Schema
Citing CMDGA
Clear Filters
Annotation type
4
chromatin state
3
candidate regulatory elements
2
accessible chromatin
2
gene expression
2
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
16
muscle of arm
15
muscle of leg
13
muscle of back
4
gastrocnemius medialis
4
muscle of trunk
4
psoas muscle
3
skeletal muscle tissue
3
stomach smooth muscle
2
esophagus muscularis mucosa
2
rectum smooth muscle tissue
2
skeletal muscle satellite cell
1
A673
1
LHCN-M2
1
SJCRH30
1
gastroesophageal sphincter
1
skeletal muscle
1
skeletal muscle cell
Organ
4
musculature of body
2
intestine
2
large intestine
Life stage
3
adult
Date released
2
September, 2022
1
August, 2017
1
October, 2019
Software used
4
chromhmm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
award.project!
ENCODE
Showing 4 of 4 results
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FileSet
DSR365BMM
released
Annotation file set
: Chromatin states for BSS01576 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR614UTJ
released
Annotation file set
: Chromatin states for BSS01475 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195QYE
released
Annotation file set
: ChromHMM 15-state model for adult Skeletal Muscle Satellite Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR802656
released
Annotation file set
: ChromHMM 13-state model for rectal smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP