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Schema
Citing CMDGA
Clear Filters
Annotation type
59
candidate regulatory elements
21
accessible chromatin
18
target gene predictions
8
histone modifications
6
binding sites
4
chromatin state
3
eQTL
3
gene expression
3
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
1
colonic mucosa
1
duodenal mucosa
1
mucosa of rectum
1
rectum smooth muscle tissue
Organ
15
heart
12
brain
9
blood vessel
9
vasculature
8
connective tissue
6
musculature of body
5
epithelium
4
intestine
4
limb
4
pancreas
3
large intestine
3
liver
vein
2
adipose tissue
2
artery
2
blood
2
bodily fluid
2
kidney
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
nerve
1
skin of body
1
small intestine
1
stomach
Date released
September, 2022
4
August, 2017
Software used
4
chromhmm
Lab
4
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
biosample_term_name!
8988T
month_released!
September, 2022
organ_slims!
vein
Showing 4 of 4 results
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Download
FileSet
TSTSR459407
released
Annotation file set
: ChromHMM 13-state model for duodenum mucosa
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR802656
released
Annotation file set
: ChromHMM 13-state model for rectal smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR362251
released
Annotation file set
: ChromHMM 13-state model for Rectal mucosa
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR420347
released
Annotation file set
: ChromHMM 13-state model for Colonic mucosa
Lab:
Stephen Parker, UMich
Project:
AMP