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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
14
candidate regulatory elements
11
eQTL
11
gene expression
11
target gene predictions
8
chromatin state
5
accessible chromatin
3
Fine-mapped variants
3
variant allelic effects
2
binding sites
2
differential activity
1
histone modifications
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ChIP-seq
Available data
6
bed bed9
2
bed bed3+
1
bigBed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
6
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
6
adipose tissue
omental fat pad
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
77
kidney
72
brain
71
lung
70
musculature of body
59
intestine
53
epithelium
51
heart
46
connective tissue
46
limb
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
penis
9
eye
8
adipose tissue
8
artery
8
gonad
8
spinal cord
7
esophagus
7
lymph node
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
6
adult
Date released
6
September, 2022
2
August, 2017
Software used
8
chromhmm
Lab
7
AMP-T2D consortium
1
Stephen Parker, UMich
Project
8
AMP
RFA
8
AMP
biosample_term_name!
GM10266
gastrocnemius medialis
omental fat pad
Showing 8 of 8 results
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Download
FileSet
DSR021VHD
released
Annotation file set
: Chromatin states for BSS01669 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR308GWR
released
Annotation file set
: Chromatin states for BSS01668 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR047TDD
released
Annotation file set
: Chromatin states for BSS01667 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR713XDC
released
Annotation file set
: Chromatin states for BSS01666 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR737TJV
released
Annotation file set
: Chromatin states for BSS01665 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669IXP
released
Annotation file set
: Chromatin states for BSS00043 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR033945
released
Annotation file set
: ChromHMM 18-state model for Adipose Nuclei
Lab:
AMP-T2D consortium
Project:
AMP