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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
3
Fine-mapped variants
3
accessible chromatin
3
target gene predictions
2
eQTL
2
gene expression
2
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
tibial nerve
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
51
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
nose
Life stage
4
adult
Date released
3
September, 2022
1
May, 2020
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
breast epithelium
organ_slims!
nose
Showing 4 of 4 results
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Download
FileSet
DSR677PFH
released
Annotation file set
: Chromatin states for BSS01842 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR344NSW
released
Annotation file set
: Chromatin states for BSS01841 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR764TDU
released
Annotation file set
: Chromatin states for BSS01840 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR205IDN
released
Annotation file set
: ChromHMM 18-state model for nerve tibial from 28 ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP