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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
7
accessible chromatin
6
chromatin state
4
target gene predictions
3
binding sites
2
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
6
bed bed3+
1
bigBed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
left cardiac atrium
4
adipocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
endothelial cell of umbilical vein
3
heart left ventricle
3
inflammatory macrophage
3
islet of Langerhans
3
temporal lobe
2
ESC derived cell line
2
angular gyrus
2
aorta
2
brain
2
erythroblast
2
heart
2
heart right ventricle
2
kidney
2
liver
2
muscle of leg
2
right cardiac atrium
1
BL-2 cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM12878
1
H1-hESC
1
HepG2
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
ascending aorta
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
coronary artery
1
duodenal mucosa
1
fibroblast of lung
1
germinal matrix
1
keratinocyte
1
layer of hippocampus
1
mammary epithelial cell
1
mature eosinophil
1
mesenchymal stem cell
1
mid-frontal lobe
1
mucosa of rectum
1
pancreas
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
thoracic aorta
1
tibial artery
1
tibial nerve
0
A549
0
CD8-positive, alpha-beta memory T cell
Organ
5
heart
1
pancreas
Date released
September, 2022
5
February, 2024
1
August, 2017
Software used
6
chromhmm
Lab
5
Patrick T. Ellinor, Broad
1
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
month_released!
September, 2022
Showing 6 of 6 results
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Download
FileSet
DSR885XQV
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1623
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR322XKD
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1600
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR988BKL
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1294
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR778BXQ
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1221
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR283TWH
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1202
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
TSTSR608480
released
Annotation file set
: ChromHMM 18-state model for Pancreas
Lab:
AMP-T2D consortium
Project:
AMP