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Schema
Citing CMDGA
Clear Filters
Annotation type
44
target gene predictions
9
candidate regulatory elements
8
gene expression
6
chromatin state
4
binding sites
2
accessible chromatin
2
histone modifications
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
5
bed bed9
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
6
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
1
cell line
1
stem cell
Biosample term
5
trophoblast cell
4
chorionic villus
2
H1-hESC
2
endodermal cell
2
trophoblast
1
ELF-1
1
ES-I3
1
H4
1
H7-hESC
1
H9
1
HUES48
1
HUES6
1
HUES64
1
UCSF-4
1
cardiac mesoderm primordium
1
ectodermal cell
1
embryonic facial prominence
1
mesodermal cell
0
A549
Organ
18
lung
6
embryo
Life stage
6
embryonic
Date released
5
September, 2022
1
August, 2017
Software used
6
chromhmm
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR504NNS
released
Annotation file set
: Chromatin states for BSS01860 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR950EAR
released
Annotation file set
: Chromatin states for BSS01859 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR622CNM
released
Annotation file set
: Chromatin states for BSS00287 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR022DVM
released
Annotation file set
: Chromatin states for BSS00285 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP