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Schema
Citing CMDGA
Clear Filters
Annotation type
31
histone modifications
13
candidate regulatory elements
8
accessible chromatin
7
target gene predictions
4
chromatin state
4
gene expression
2
variant allelic effects
1
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
3
bigBed bed9
1
bed bed9+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
7
mature neutrophil
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
left cardiac atrium
4
adipocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
endothelial cell of umbilical vein
3
heart left ventricle
3
inflammatory macrophage
3
islet of Langerhans
3
temporal lobe
2
ESC derived cell line
2
angular gyrus
2
aorta
2
brain
2
erythroblast
2
heart
2
heart right ventricle
kidney
2
liver
2
muscle of leg
2
right cardiac atrium
1
BL-2 cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM12878
1
H1-hESC
1
HepG2
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
ascending aorta
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
coronary artery
1
duodenal mucosa
1
fibroblast of lung
1
germinal matrix
1
keratinocyte
1
layer of hippocampus
1
mammary epithelial cell
1
mature eosinophil
1
mesenchymal stem cell
1
mid-frontal lobe
1
mucosa of rectum
1
pancreas
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
thoracic aorta
1
tibial artery
1
tibial nerve
Organ
3
heart
Life stage
1
adult
1
child
Date released
September, 2022
2
April, 2019
1
May, 2022
1
October, 2019
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
CD14-positive, CD16-negative classical monocyte
kidney
month_released!
September, 2022
Showing 4 of 4 results
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR491DJZ
released
Annotation file set
: ChromHMM 18-state model for adult Heart Left Ventricle from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR733XPD
released
Annotation file set
: ChromHMM 18-state model for heart left ventricle from ENCODE ChIP-seq data. ROADMAP heart left ventricle Annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR444PCA
released
Annotation file set
: ChromHMM 15-state model for heart left ventricle from ENCODE ChIP-seq data. ROADMAP heart left ventricle Annotation
Lab:
AMP-T2D consortium
Project:
AMP