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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
20
heart
19
stomach
18
A549
18
brain
16
lung
15
kidney
15
small intestine
14
adrenal gland
14
placenta
13
large intestine
13
left lung
11
right lung
11
thymus
10
common myeloid progenitor, CD34-positive
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
liver
9
renal cortex interstitium
9
renal pelvis
7
K562
7
mature neutrophil
7
spinal cord
6
B cell
6
adipose tissue
6
heart left ventricle
6
left cardiac atrium
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
CD8-positive, alpha-beta memory T cell
5
MCF-7
5
adipocyte
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
mononuclear cell
5
sigmoid colon
5
temporal lobe
5
trophoblast cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
foreskin keratinocyte
4
layer of hippocampus
4
neural progenitor cell
4
ovary
4
thyroid gland
4
tibial nerve
4
transverse colon
3
CD14-positive monocyte
3
CD4-positive, alpha-beta T cell
3
CD4-positive, alpha-beta memory T cell
3
HeLa-S3
3
Peyer's patch
3
T cell
3
ascending aorta
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
duodenal mucosa
3
endocrine pancreas
3
endometrium adenocarcinoma
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
mesenchymal stem cell
3
mucosa of rectum
3
natural killer cell
3
neurosphere
3
pancreas
3
retina
3
substantia nigra
3
testis
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
breast epithelium
2
cerebellum
2
chorion membrane
2
dermis blood vessel endothelial cell
2
endodermal cell
2
erythroblast
2
esophagus
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
fibroblast of lung
2
foreskin fibroblast
2
frontal cortex
2
germinal matrix
2
islet of Langerhans
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mammary gland epithelial cell
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive T cell
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
regulatory T cell
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skin fibroblast
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM08714
1
GM10248
1
GM10266
1
GM12875
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
Disease term
1
clear cell renal carcinoma
Organ
1
kidney
Life stage
1
adult
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
April, 2019
organ_slims!
musculature of body
relevant_life_stage!
unknown
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR032YTT
released
Annotation file set
: Chromatin states for BSS00160 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP