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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
target gene predictions
2
binding sites
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
15
small intestine
13
large intestine
7
K562
5
sigmoid colon
4
transverse colon
3
Peyer's patch
3
colonic mucosa
3
duodenal mucosa
3
mucosa of rectum
2
GM12878
2
NAMALWA cell
2
muscle layer of colon
2
muscle layer of duodenum
2
rectum smooth muscle tissue
1
CMK
1
DOHH2
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
HAP-1
1
HCT116
1
HL-60
1
HT-29
1
KBM-7
1
NB4
1
OCI-LY7
1
RPMI8226
1
SU-DHL-6
1
SW480
1
colon epithelial cell
Disease term
1
colorectal adenocarcinoma
Organ
1
blood
1
bodily fluid
1
intestine
1
large intestine
0
trachea
Life stage
1
adult
1
unknown
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR947XYI
released
Annotation file set
: Chromatin states for BSS00395 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815ZTC
released
Annotation file set
: Chromatin states for BSS00492 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP