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Schema
Citing CMDGA
Clear Filters
Annotation type
5
histone modifications
3
binding sites
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
9
liver
2
HepG2
2
hepatocyte
1
HuH-7
1
HuH-7.5
1
hepatic stellate cell
1
right lobe of liver
Disease term
1
hepatocellular carcinoma
Organ
5
heart
2
liver
Life stage
1
child
Date released
1
August, 2017
1
September, 2022
Software used
2
chromhmm
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
month_released!
May, 2021
Showing 2 of 2 results
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Download
FileSet
DSR533TVB
released
Annotation file set
: Chromatin states for BSS00558 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP