Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
7
histone modifications
5
accessible chromatin
4
binding sites
4
candidate regulatory elements
4
target gene predictions
3
chromatin state
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
cell line
1
primary cell
Biosample term
9
liver
2
HepG2
2
hepatocyte
1
HuH-7
1
HuH-7.5
1
hepatic stellate cell
1
right lobe of liver
Disease term
1
hepatocellular carcinoma
Organ
3
liver
1
connective tissue
Life stage
1
adult
1
child
Date released
2
September, 2022
1
August, 2017
Software used
3
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
organ_slims!
penis
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR533TVB
released
Annotation file set
: Chromatin states for BSS00558 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR130QHH
released
Annotation file set
: Chromatin states for BSS00553 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP