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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
accessible chromatin
2
binding sites
2
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
18
A549
13
common myeloid progenitor, CD34-positive
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
8
B cell
7
CD8-positive, alpha-beta memory T cell
7
K562
7
mature neutrophil
6
adipocyte
6
mononuclear cell
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
fibroblast of lung
4
foreskin keratinocyte
4
neural progenitor cell
3
CD4-positive, alpha-beta T cell
3
HeLa-S3
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
3
skeletal muscle myoblast
2
22Rv1
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
fibroblast of breast
2
foreskin fibroblast
2
hepatocyte
2
kidney tubule cell
2
muscle cell
2
myoepithelial cell of mammary gland
2
neutrophil
2
skeletal muscle satellite cell
2
skin fibroblast
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DG-75 cell
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
JVM-2 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SK-N-MC
1
SU-DHL-6
1
SUDHL5
1
SW480
1
U-266 cell
1
UCSF-4
1
VCaP cell
1
WERI-Rb-1
1
WI38
1
Z-138
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bipolar neuron
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
colon carcinoma
1
colon epithelial cell
1
ectodermal cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
Organ
2
bronchus
2
epithelium
1
bone element
Life stage
3
unknown
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
CD14-positive, CD16-negative classical monocyte
biosample_type!
tissue
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR960WNO
released
Annotation file set
: Chromatin states for BSS01107 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702JKN
released
Annotation file set
: Chromatin states for BSS00153 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524OJC
released
Annotation file set
: Chromatin states for BSS00150 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP