Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
5
target gene predictions
4
accessible chromatin
2
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
9
hematopoietic multipotent progenitor cell
5
adipocyte
5
embryonic stem cell
4
neural progenitor cell
2
endodermal cell
2
mesenchymal stem cell
2
muscle cell
1
bipolar neuron
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
ectodermal cell
1
hepatocyte
1
islet precursor cell
1
mesendoderm
1
mesodermal cell
1
neural cell
1
neuron
1
olfactory neurosphere cell line
1
smooth muscle cell
1
trophoblast cell
Organ
5
connective tissue
Life stage
1
adult
unknown
Date released
4
August, 2017
1
September, 2022
Software used
5
chromhmm
Lab
4
Stephen Parker, UMich
1
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
Caco-2 cell
body of pancreas
relevant_life_stage!
unknown
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR148SNR
released
Annotation file set
: Chromatin states for BSS00039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP