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Schema
Citing CMDGA
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Annotation type
8
accessible chromatin
4
target gene predictions
2
candidate regulatory elements
1
chromatin state
1
gene expression
1
histone modifications
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
6
CD4-positive, alpha-beta memory T cell
5
adipocyte
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
trophoblast cell
4
foreskin keratinocyte
4
neural progenitor cell
3
CD14-positive, CD16-negative classical monocyte
3
T-helper 17 cell
3
common myeloid progenitor, CD34-positive
3
fibroblast of lung
3
keratinocyte
3
neurosphere
2
22Rv1
2
B cell
2
CD8-positive, alpha-beta memory T cell
2
ESC derived cell line
2
H1-hESC
2
HepG2
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
alternatively activated macrophage
2
bronchial epithelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
foreskin fibroblast
2
hepatocyte
2
mature neutrophil
2
neutrophil
2
skeletal muscle myoblast
2
skin fibroblast
1
A673
1
AG04449 cell
1
AG04450 cell
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
CWRU1
1
DG-75 cell
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18507
1
H7-hESC
1
H9
1
HEK293
1
HEK293T
1
HK-2 cell
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
IMR-90
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
MG63
1
NCI-H460 cell
1
NT2-D1 cell
1
PC-9
1
Panc1
1
SJCRH30
1
SK-N-MC
1
SUDHL5
1
T cell
1
T-helper 1 cell
1
T-helper 2 cell
1
U-266 cell
1
UCSF-4
1
WERI-Rb-1
1
WI38
1
Z-138
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
colon carcinoma
1
colon epithelial cell
1
dermis blood vessel endothelial cell
1
ectodermal cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hematopoietic multipotent progenitor cell
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iris pigment epithelial cell
1
islet precursor cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
lung microvascular endothelial cell
1
lymphocyte
1
mammary epithelial cell
1
mammary gland epithelial cell
1
medulloblastoma
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell
1
mononuclear cell
1
naive T cell
1
neural cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
osteoblast
1
pericyte cell
1
pulmonary artery endothelial cell
1
regular cardiac myocyte
1
regulatory T cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
stromal cell of bone marrow
1
urothelium cell line
Life stage
1
unknown
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
ACC112
biosample_type!
tissue
relevant_life_stage!
adult
Showing 1 of 1 results
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Download
FileSet
DSR424EJT
released
Annotation file set
: Chromatin states for BSS00089 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP