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Citing CMDGA
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Annotation type
4
target gene predictions
3
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
15
small intestine
13
large intestine
5
sigmoid colon
4
transverse colon
3
Peyer's patch
3
colonic mucosa
3
duodenal mucosa
3
mucosa of rectum
3
retina
2
eye
2
muscle layer of colon
2
muscle layer of duodenum
2
rectum smooth muscle tissue
1
HCT116
1
HT-29
1
SW480
1
WERI-Rb-1
1
colon epithelial cell
1
fibroblast of the conjunctiva
1
iris pigment epithelial cell
1
retinal pigment epithelial cell
Organ
1
epithelium
1
intestine
1
large intestine
0
eye
Life stage
1
unknown
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
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Download
FileSet
DSR024YCW
released
Annotation file set
: Chromatin states for BSS00223 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP