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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
histone modifications
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
1
bigBed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
5
left cardiac atrium
3
heart left ventricle
3
islet of Langerhans
3
temporal lobe
2
angular gyrus
2
aorta
2
brain
2
heart
2
heart right ventricle
2
kidney
2
liver
2
muscle of leg
2
right cardiac atrium
1
ascending aorta
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
coronary artery
1
duodenal mucosa
1
germinal matrix
1
layer of hippocampus
1
mid-frontal lobe
1
mucosa of rectum
1
pancreas
1
rectum smooth muscle tissue
1
skeletal muscle
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
thoracic aorta
1
tibial artery
1
tibial nerve
Organ
1
blood vessel
1
intestine
1
large intestine
1
vasculature
Life stage
1
adult
Date released
September, 2022
1
August, 2017
1
October, 2019
Software used
2
chromhmm
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
month_released!
September, 2022
Showing 2 of 2 results
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Download
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR420347
released
Annotation file set
: ChromHMM 13-state model for Colonic mucosa
Lab:
Stephen Parker, UMich
Project:
AMP