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Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
13
large intestine
5
sigmoid colon
4
transverse colon
3
colonic mucosa
3
mucosa of rectum
2
muscle layer of colon
2
rectum smooth muscle tissue
1
HCT116
1
HT-29
1
SW480
1
colon epithelial cell
Organ
2
intestine
2
large intestine
2
musculature of body
Life stage
1
adult
Date released
1
August, 2017
1
September, 2022
Software used
2
chromhmm
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
biosample_term_name!
dermis lymphatic vessel endothelial cell
Showing 2 of 2 results
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Download
FileSet
DSR614UTJ
released
Annotation file set
: Chromatin states for BSS01475 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR802656
released
Annotation file set
: ChromHMM 13-state model for rectal smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP