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Schema
Citing CMDGA
Clear Filters
Annotation type
7
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
target gene predictions
1
variant allelic effects
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
6
bed bed3+
1
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
0
in vitro differentiated cells
Biosample term
10
hematopoietic multipotent progenitor cell
7
liver
6
adipocyte
6
adipose tissue
6
adrenal gland
6
heart left ventricle
6
stomach
5
embryonic stem cell
5
left cardiac atrium
5
sigmoid colon
5
spleen
5
temporal lobe
4
angular gyrus
4
aorta
4
body of pancreas
4
caudate nucleus
4
endocrine pancreas
4
gastrocnemius medialis
4
heart right ventricle
4
layer of hippocampus
4
psoas muscle
4
thyroid gland
4
tibial nerve
4
transverse colon
3
Peyer's patch
3
ascending aorta
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
duodenal mucosa
3
heart
3
islet of Langerhans
3
kidney
3
mucosa of rectum
3
ovary
3
pancreas
3
right cardiac atrium
3
skeletal muscle tissue
3
small intestine
3
stomach smooth muscle
3
substantia nigra
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
brain
2
breast epithelium
2
cerebellum
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
frontal cortex
2
lower leg skin
2
lung
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
rectum smooth muscle tissue
2
right atrium auricular region
2
testis
2
vagina
1
Ammon's horn
1
bipolar neuron
1
cerebellar cortex
1
chorion membrane
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
mesenchymal stem cell
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
occipital lobe
1
olfactory neurosphere cell line
1
pons
1
putamen
1
right lobe of liver
1
skeletal muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thymus
1
urinary bladder
1
uterus
Organ
5
heart
2
intestine
2
large intestine
2
musculature of body
Life stage
1
adult
embryonic
Date released
5
February, 2024
1
August, 2017
1
September, 2022
Software used
7
chromhmm
Lab
5
Patrick T. Ellinor, Broad
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
relevant_life_stage!
embryonic
Showing 7 of 7 results
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Download
FileSet
DSR614UTJ
released
Annotation file set
: Chromatin states for BSS01475 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885XQV
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1623
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR322XKD
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1600
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR988BKL
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1294
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR778BXQ
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1221
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
DSR283TWH
released
Annotation file set
: Chromatin state from ChIP-seq for frozen human left atrium lateral free wall of LA1202
Lab:
Patrick T. Ellinor, Broad
Project:
AMP
FileSet
TSTSR802656
released
Annotation file set
: ChromHMM 13-state model for rectal smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP