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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
18
A549
18
heart
18
stomach
16
brain
16
muscle of arm
15
lung
14
adrenal gland
14
kidney
14
placenta
14
small intestine
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
11
right lung
10
common myeloid progenitor, CD34-positive
10
right kidney
10
thymus
9
hematopoietic multipotent progenitor cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
7
liver
7
spinal cord
6
B cell
6
K562
6
adipose tissue
5
CD8-positive, alpha-beta memory T cell
5
MCF-7
5
mononuclear cell
5
spleen
5
trophoblast cell
4
body of pancreas
4
chorionic villus
4
gastrocnemius medialis
4
heart left ventricle
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
sigmoid colon
4
thyroid gland
4
transverse colon
3
CD14-positive monocyte
3
CD4-positive, alpha-beta memory T cell
3
HeLa-S3
3
Peyer's patch
3
T cell
3
caudate nucleus
3
endocrine pancreas
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
natural killer cell
3
neurosphere
3
psoas muscle
3
retina
3
testis
3
tibial nerve
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
LNCaP clone FGC
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
angular gyrus
2
aorta
2
ascending aorta
2
breast epithelium
2
cerebellum
2
chorion membrane
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
frontal cortex
2
heart right ventricle
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive T cell
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
regulatory T cell
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle tissue
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
C4-2B
1
COLO829
1
Caco-2 cell
1
Caki2
1
DOHH2
1
ELF-1
1
ES-I3
1
GM04503
1
GM04504
1
GM10248
1
GM10266
1
GM12875
1
GM12878
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H1-hESC
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJSA1
1
SK-MEL-5
1
SU-DHL-6
1
SW480
1
UCSF-4
1
VCaP cell
1
adipocyte
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
bipolar neuron
Organ
3
gonad
3
testis
Life stage
2
adult
1
embryonic
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR845ZVQ
released
Annotation file set
: Chromatin states for BSS01719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR211VUO
released
Annotation file set
: Chromatin states for BSS01718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666MOR
released
Annotation file set
: Chromatin states for BSS01715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP