Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
5
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
15
small intestine
13
large intestine
6
spleen
5
sigmoid colon
4
foreskin keratinocyte
4
transverse colon
3
Peyer's patch
3
colonic mucosa
3
duodenal mucosa
3
fibroblast of dermis
3
keratinocyte
3
mucosa of rectum
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
foreskin fibroblast
2
lower leg skin
2
muscle layer of colon
2
muscle layer of duodenum
2
rectum smooth muscle tissue
2
skin fibroblast
1
COLO829
1
GM23248
1
HCT116
1
HT-29
1
RPMI7951
1
SK-MEL-5
1
SW480
1
colon epithelial cell
1
epidermal melanocyte
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
skin of body
Organ
4
intestine
4
large intestine
0
skin of body
0
spleen
Life stage
4
adult
Date released
4
September, 2022
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR160UQZ
released
Annotation file set
: Chromatin states for BSS01851 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR172AJC
released
Annotation file set
: Chromatin states for BSS01850 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096PNG
released
Annotation file set
: Chromatin states for BSS01849 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286PKV
released
Annotation file set
: Chromatin states for BSS01848 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP