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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
13
candidate regulatory elements
11
target gene predictions
9
binding sites
8
chromatin state
6
accessible chromatin
3
histone modifications
1
variant allelic effects
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ChIP-seq
Available data
7
bed bed9
1
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
8
Homo sapiens
Biosample type
8
primary cell
cell line
Biosample term
3
mammary gland epithelial cell
2
myoepithelial cell of mammary gland
1
fibroblast of mammary gland
1
luminal epithelial cell of mammary gland
1
mammary epithelial cell
Organ
69
kidney
69
musculature of body
57
brain
55
intestine
52
epithelium
50
heart
48
lung
limb
45
connective tissue
32
extraembryonic component
32
large intestine
32
vasculature
27
blood vessel
24
stomach
21
skin of body
20
small intestine
18
embryo
15
placenta
14
adrenal gland
14
pancreas
13
liver
13
ureter
11
thymus
10
adipose tissue
8
eye
8
mammary gland
8
spinal cord
7
artery
7
esophagus
7
gonad
6
penis
6
spleen
5
bone element
5
vein
4
lymphoid tissue
4
nerve
4
ovary
4
prostate gland
4
thyroid gland
3
mouth
3
skeleton
3
testis
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
1
uterus
Life stage
5
adult
2
unknown
Date released
7
September, 2022
1
August, 2017
Software used
8
chromhmm
Lab
7
AMP-T2D consortium
1
Stephen Parker, UMich
Project
8
AMP
RFA
8
AMP
biosample_type!
cell line
month_released!
May, 2019
organ_slims!
limb
Showing 8 of 8 results
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Download
FileSet
DSR157NDF
released
Annotation file set
: Chromatin states for BSS01341 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR291DVC
released
Annotation file set
: Chromatin states for BSS01340 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR380JQI
released
Annotation file set
: Chromatin states for BSS01185 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR848OMG
released
Annotation file set
: Chromatin states for BSS00343 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267DXB
released
Annotation file set
: Chromatin states for BSS01213 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR285UOJ
released
Annotation file set
: Chromatin states for BSS01211 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887SUU
released
Annotation file set
: Chromatin states for BSS01209 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR538274
released
Annotation file set
: ChromHMM 13-state model for HMEC
Lab:
Stephen Parker, UMich
Project:
AMP