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Schema
Citing CMDGA
Clear Filters
Annotation type
58
candidate regulatory elements
51
binding sites
43
target gene predictions
30
accessible chromatin
29
histone modifications
5
chromatin state
4
eQTL
3
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
cell line
Biosample term
1
GM12878
1
K562
1
colonic mucosa
1
mucosa of rectum
1
rectum smooth muscle tissue
Organ
15
heart
12
brain
9
blood vessel
9
vasculature
8
connective tissue
6
musculature of body
5
epithelium
4
intestine
4
limb
4
pancreas
3
large intestine
3
liver
3
vein
2
adipose tissue
2
artery
2
blood
2
bodily fluid
2
kidney
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
nerve
1
skin of body
1
small intestine
1
stomach
0
skeleton
Life stage
1
adult
Date released
September, 2022
5
August, 2017
Software used
5
chromhmm
Lab
5
Stephen Parker, UMich
Project
5
AMP
RFA
5
AMP
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
TSTSR802656
released
Annotation file set
: ChromHMM 13-state model for rectal smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR362251
released
Annotation file set
: ChromHMM 13-state model for Rectal mucosa
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR420347
released
Annotation file set
: ChromHMM 13-state model for Colonic mucosa
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR418295
released
Annotation file set
: ChromHMM 13-state model for for human K562
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR588101
released
Annotation file set
: ChromHMM 13-state model for GM12878
Lab:
Stephen Parker, UMich
Project:
AMP