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Schema
Citing CMDGA
Clear Filters
Annotation type
16
gene expression
10
accessible chromatin
6
differential activity
6
eQTL
3
Fine-mapped variants
2
candidate regulatory elements
2
variant allelic effects
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
6
Gene expression levels
Annotation type Category
4
RNA-seq
2
single cell RNA-seq
Available data
4
tsv
File set status
6
released
Organism
6
Homo sapiens
Biosample type
3
cell line
2
primary cell
1
tissue
Biosample term
7
induced pluripotent stem cell
3
EndoC_BH1
3
pancreatic MUC5B+ductal cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic alpha+beta cell
3
pancreatic beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
pancreatic stellate cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
T Cell
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
1
aorta wall
1
liver
1
skeletal muscle
1
subcutaneous adipose tissue
1
visceral abdominal adipose tissue
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
coronary artery disease
Organ
5
epithelium
3
pancreas
2
kidney
1
adipose tissue
1
connective tissue
Life stage
3
adult
Date released
2
March, 2023
2
September, 2023
1
February, 2023
1
February, 2024
Software used
3
deseq2
Lab
2
AMP-T2D consortium
2
Anna Gloyn, Oxford
2
KPMP
Project
2
AMP
2
KPMP
2
community
RFA
2
AMP
2
KPMP
2
community
annotation_type!
binding sites
biosample_term_name!
Distal Convoluted Tubule Cell Type 1
Showing 6 of 6 results
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Download
FileSet
DSR639EWK
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR316NWY
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR207ODY
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273DTH
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siRNA mediated knockdown
Lab:
Anna Gloyn, Oxford
Project:
community
FileSet
DSR163KQO
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following CRISPR/Cas9 knockout
Lab:
Anna Gloyn, Oxford
Project:
community