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Schema
Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1070
target gene predictions
977
histone modifications
chromatin state
810
binding sites
570
accessible chromatin
443
gene expression
159
eQTL
82
variant allelic effects
74
Fine-mapped variants
6
differential activity
5
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
1
other
1
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
6
Gene expression levels
Annotation type Category
6
RNA-seq
Available data
6
tsv
File set status
6
released
Organism
6
Homo sapiens
Biosample type
5
tissue
1
cell line
Biosample term
1
EndoC_BH1
1
aorta wall
1
liver
1
skeletal muscle
1
subcutaneous adipose tissue
1
visceral abdominal adipose tissue
Disease term
5
coronary artery disease
Organ
2
adipose tissue
2
connective tissue
1
blood vessel
1
epithelium
1
liver
1
musculature of body
1
pancreas
1
vasculature
Life stage
5
adult
Date released
5
February, 2024
1
February, 2023
Software used
5
deseq2
Lab
110
KPMP
39
Kyle Gaulton, UCSD
9
Anna Gloyn, Oxford
6
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
annotation_type!
chromatin state
biosample_term_name!
pancreatic delta cell
Showing 6 of 6 results
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FileSet
DSR483AIN
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for visceral abdominal adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR639EWK
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR712UEE
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR054IUR
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR971CLJ
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for aorta wall (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP