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Citing CMDGA
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Annotation type
11
gene expression
8
accessible chromatin
5
differential activity
1
target gene predictions
1
variant allelic effects
Annotation Category
5
Gene expression levels
Annotation type Category
3
RNA-seq
2
single cell RNA-seq
Available data
3
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
3
cell line
2
primary cell
Biosample term
3
EndoC_BH1
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic alpha+beta cell
3
pancreatic beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
Connecting Tubule Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
Medullary Thick Ascending Limb Cell
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Transitional Principal-Intercalated Cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
5
epithelium
3
pancreas
2
kidney
Life stage
2
adult
Date released
2
March, 2023
2
September, 2023
1
February, 2023
Software used
2
deseq2
Lab
2
Anna Gloyn, Oxford
2
KPMP
1
AMP-T2D consortium
Project
2
KPMP
2
community
1
AMP
RFA
2
KPMP
2
community
1
AMP
annotation_type!
eQTL
Showing 5 of 5 results
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FileSet
DSR752ETN
released
Annotation file set
: Differential activity annotation of Degenerative Connecting Tubule Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR057CVD
released
Annotation file set
: Differential activity annotation of Degenerative Connecting Tubule Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273DTH
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siRNA mediated knockdown
Lab:
Anna Gloyn, Oxford
Project:
community
FileSet
DSR163KQO
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following CRISPR/Cas9 knockout
Lab:
Anna Gloyn, Oxford
Project:
community