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Citing CMDGA
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Annotation type
5
gene expression
2
eQTL
1
differential activity
Annotation Category
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
3
RNA-seq
Available data
1
tsv
File set status
3
released
Genome assembly (visualization)
hg19
2
GRCh38
1
hg18
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
7
induced pluripotent stem cell
6
lymphoblastoid cell line
4
islet of Langerhans
3
EndoC_BH1
3
liver
3
skin of body
3
subcutaneous adipose tissue
2
brain
2
iPSC derived cell line
2
muscle
2
putamen
2
substantia nigra
2
visceral abdominal adipose tissue
1
abdominal aorta artery
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
aorta wall
1
breast
1
caudate nucleus
1
cerebellar hemisphere
1
cerebellum
1
coronary artery
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
frontal cortex
1
heart left ventricle
1
hypothalamus
1
layer of hippocampus
1
lung
1
minor salivary gland
1
nucleus accumbens
1
omental fat pad
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
retina
1
right atrium auricular region
1
skeletal muscle
1
spinal cord
1
spleen
1
stomach
1
testis
1
thyroid gland
1
tibial artery
1
tibial nerve
1
uterus
1
vagina
Disease term
1
coronary artery disease
Organ
3
adipose tissue
3
connective tissue
Life stage
2
adult
Date released
1
August, 2021
1
February, 2024
1
January, 2022
Software used
1
deseq2
1
mach2qtl
1
qTLtools
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
assembly!
hg19
biosample_type!
primary cell
organ_slims!
intestine
Showing 3 of 3 results
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Download
FileSet
DSR639EWK
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR943WPJ
released
Annotation file set
: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP