Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
11
gene expression
8
accessible chromatin
5
differential activity
1
binding sites
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
5
Gene expression levels
1
cis-regulatory elements
Annotation type Category
3
RNA-seq
2
single cell RNA-seq
1
ChIP-seq
Available data
3
tsv
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
1
hg19
Organism
6
Homo sapiens
Biosample type
4
cell line
2
primary cell
Biosample term
86
monocyte
30
CD8-positive, alpha-beta T cell
16
neural progenitor cell
11
breast cancer cell
9
gastric cancer cell
8
Rhabdomyosarcoma
8
neuroblastoma cell
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
induced pluripotent stem cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
hESC cell
6
liposarcoma
6
neuroblastoma cell line
6
squamous cell lung carcinoma
5
HepG2
5
T-cell acute lymphoblastic leukemia
5
melanoma cell
5
osteosarcoma
5
pancreatic ductal cell
4
EndoC_BH1
4
hepatocyte
4
pancreatic acinar cell
4
rhabdomyosarcoma cell
3
Ewing sarcoma
3
acute myeloid leukemia
3
brain
3
diffuse large B-cell lymphoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
keratinocyte
3
liver
3
lymphoblast
3
lymphoblastoid cell line
3
mammary epithelial cell
3
neuronal stem cell
3
pancreatic MUC5B+ductal cell
3
pancreatic alpha cell
3
pancreatic alpha+beta cell
3
pancreatic beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic ductal adenocarcinoma
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
pancreatic stellate cell
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
B cell
2
B-lymphocyte
2
COLO205
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
HS-SY-2 cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Jurkat
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
MCF-7
2
Mantle cell lymphoma
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
RS4-11 cell
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
Rh-4 cell
2
T Cell
2
Th1 cell
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
2
acute myeloid leukemia cell
2
bronchial epithelial cell
2
cardiac muscle cell
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
embryonic stem cell
2
endometriosis
2
epithelial ovarian cancer cell
2
erythroid progenitor cell
2
esophageal carcinoma
2
fibroblast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
glioblastoma multiforme cancer stem cell
2
hematopoietic cell
2
hepatic stellate cell
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
kidney
2
leukemic stem cell
2
mantle cell lymphoma cell
2
medulloblastoma cell line
2
metastatic melanoma
2
multiple myeloma cell line
2
natural killer cell
2
osteoblast
2
pancreatic cell line
2
placenta
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
prostate gland
2
synovial sarcoma cell
2
tracheal epithelial cell
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urinary bladder cancer cell
1
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG08470 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
Adipose stromal cell
1
AsPC-1 cell
1
B-cell lymphoma cell
1
BCBL-1 cell
1
BE(2)-C
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BICR 31
1
BJ cell
1
BT-474 cell
1
BT-549 cell
1
Barrett's epithelial cell line
1
Barrett's esophagus
1
Brodmann (1909) area 9
1
BxPC-3 cell
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
5
epithelium
3
pancreas
2
kidney
Life stage
2
adult
Date released
2
March, 2023
2
September, 2023
1
February, 2021
1
February, 2023
Software used
2
deseq2
1
macs
Lab
2
AMP-T2D consortium
2
Anna Gloyn, Oxford
2
KPMP
Project
2
AMP
2
KPMP
2
community
RFA
2
AMP
2
KPMP
2
community
biosample_term_name!
chronic lymphocytic leukemia
prostate gland
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
DSR887EYM
released
Annotation file set
: Differential activity annotation of Degenerative Principal Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR497HXB
released
Annotation file set
: Differential activity annotation of Degenerative Principal Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273DTH
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siRNA mediated knockdown
Lab:
Anna Gloyn, Oxford
Project:
community
FileSet
DSR163KQO
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following CRISPR/Cas9 knockout
Lab:
Anna Gloyn, Oxford
Project:
community
FileSet
DSR257RKK
released
Annotation file set
: Histone modifications annotation for Pancreas EndoC-BH1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP